imzML is already implemented in several MS imaging applications.- data exchange and evaluation within the COMPUTIS consortium (see below)
- new MS imaging software for the ABI FlashQuant (Markus Stoeckli)
- "Indigo Platform" including DESI imaging by Prosolia (Randy Jullian)
- a converter, generating imzML files out of LTQ based Thermo raw files
More detailed information on MS imaging software tools which were developed by COMPUTIS partners is shown below. These tools are currently used for internal evaluation. Some will be made available in the (near) future.
Datacube Explorer (AMOLF) |  | - dynamic scrolling through masses in dataset
- Spectral analysis of region-of-interest
- Self-organising map feature for image classification
- Free to download
| | | BioMap (Novartis) |  | - Browsing through selected ion images
- Coregistration of images
- Extensive analysis tools
| | | fxSpectViewer (CEA) |  | - Automatic segmentation of images
- Manipulation of very large data files without binning
- Runs under Linux and Windows
| | | Mirion (Justus Liebig University) |  | - Mass spectra directly accessible through image
- Overlay of different masses
- Overlay of optical and MS image
- Compatible with high mass accuracy images
| | | raw to imzML converter (Betaversion!) |  | - Converts LTQ based Thermo raw files into imzML files (RC1)
- Contains the converter, a help file and the raw file origin of the first example imzML file
- Free to download!
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